| Season One | 26 cgi animated color episodes in 30 minute format |
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| Ep | PN | Airdate | Title |
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|
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| 1 | | Sep 16/96 | Beast Wars |
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| 2 | | Sep 17/96 | Beast Wars, Part 2 |
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| 3 | | Sep 18/96 | The Web |
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| 4 | | Sep 23/96 | Equal Measures |
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| 5 | | Sep 24/96 | Chain of Command |
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| 6 | | Sep 25/96 | Power Surge |
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| 7 | | Sep 30/96 | Fallen Comrades |
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| 8 | | Oct 07/96 | Double Jeopardy |
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| 9 | | Oct 08/96 | The Probe |
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| 10 | | Oct 14/96 | Gorilla Warfare |
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| 11 | | Oct 15/96 | A Better Mousetrap |
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| 12 | | Nov 01/96 | Victory |
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| 13 | | Nov 04/96 | Dark Designs |
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| 14 | | Nov 05/96 | Double Dinobot |
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| 15 | | Nov 11/96 | The Spark |
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| 16 | | Nov 18/96 | The Trigger |
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| 17 | | Nov 19/96 | The Trigger, Part 2 |
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| 18 | | Jan 06/97 | Spider's Game |
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| 19 | | Jan 07/97 | Call of the Wild |
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| 20 | | Jan 27/97 | Dark Voyage |
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| 21 | | Feb 03/97 | Possession |
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| 22 | | Feb 10/97 | Low Road |
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| 23 | | Feb 17/97 | Law of the Jungle |
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| 24 | | Feb 21/97 | Before the Storm |
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| 25 | | Mar 31/97 | Other Voices |
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| 26 | | Apr 01/97 | Other Voices, Part 2 |
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| Season Two | 13 cgi animated color episodes in 30 minute format |
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| Ep | PN | Airdate | Title |
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|
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| 27 | | Oct 26/97 | Aftermath |
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| 28 | | Nov 02/97 | Coming of the Fuzors |
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| 29 | | Nov 09/97 | Coming of the Fuzors, Part 2 |
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| 30 | | Nov 16/97 | Tangled Web |
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| 31 | | Nov 23/97 | Maximal, No More |
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| 32 | | Feb 04/97 | Other Visits |
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| 33 | | Feb 13/97 | Other Visits, Part 2 |
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| 34 | | Feb 20/97 | Bad Spark |
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| 35 | | Feb 27/97 | Code of Hero |
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| 36 | | Mar 06/97 | Transmutate |
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| 37 | | Mar 11/97 | The Agenda |
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| 38 | | Mar 12/97 | The Agenda, Part 2 |
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| 39 | | Mar 13/97 | The Agenda, Part 3 |
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| Season Three | 13 cgi animated color episodes in 30 minute format |
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| Ep | PN | Airdate | Title |
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|
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| 40 | | Oct 24/98 | Optimal Situation (Part 4) |
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| 41 | | Oct 31/98 | Deep Metal |
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| 42 | | Nov 07/98 | Changing of the Guard |
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| 43 | | Nov 14/98 | Cutting Edge |
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| 44 | | Jan 30/99 | Feral Scream |
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| 45 | | Feb 06/99 | Feral Scream, Part 2 |
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| 46 | | Feb 13/99 | Proving Grounds |
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| 47 | | Feb 18/99 | Go With the Flow |
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| 48 | | Feb 22/99 | Crossing the Rubicon |
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| 49 | | Mar 15/99 | Master Blaster |
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| 50 | | Apr 14/99 | Other Victories |
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| 51 | | Apr 21/99 | Nemesis |
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| 52 | | Apr 28/99 | Nemesis, Part 2 |
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Name changed to Beast Machines
| Season Four | 13 cgi animated color episodes in 30 minute format |
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| Ep | PN | Airdate | Title |
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|
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| 53 | | Sep 15/99(CA) | The Reformatting |
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| 54 | | Sep 17/99(CA) | Master of the House |
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| 55 | | Sep 24/99(CA) | Fires of the Past |
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| 56 | | Oct 06/99(CA) | Mercenary Pursuits |
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| 57 | | Oct 13/99(CA) | Forbidden Fruit |
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| 58 | | Oct 20/99(CA) | The Weak Component |
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| 59 | | Oct 27/99(CA) | Lost and Found |
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| 60 | | Nov 10/99(CA) | Revelations, Part One: Descent |
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| 61 | | Nov 17/99(CA) | Revelations, Part Two: Apocalypse |
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| 62 | | Nov 24/99(CA) | Survivor |
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| 63 | | Dec 01/99(CA) | The Key |
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| 64 | | Dec 08/99(CA) | The Catalyst |
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| 65 | | Dec 15/99(CA) | End of the Line |
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| Season Five | 13 cgi animated color episodes in 30 minute format |
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| Ep | PN | Airdate | Title |
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|
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| 66 | | Feb 09/00(CA) | Fallout |
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| 67 | | Feb 16/00(CA) | Savage Noble |
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| 68 | | Feb 23/00(CA) | Prometheus Unbound |
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| 69 | | Mar 01/00(CA) | In Darkest Knight |
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| 70 | | Mar 08/00(CA) | A Wolf in the Fold |
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| 71 | | Mar 15/00(CA) | Native Soil |
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| 72 | | Mar 22/00(CA) | Sparkwar, Part One: Strike |
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| 73 | | Mar 29/00(CA) | Sparkwar, Part Two: Search |
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| 74 | | Apr 05/00(CA) | Sparkwar, Part Three: Siege |
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| 75 | | Apr 12/00(CA) | Spark of Darkness |
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| 76 | | Apr 19/00(CA) | Endgame, Part One: The Downward Spiral |
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| 77 | | Apr 26/00(CA) | Endgame, Part Two: When Legends Fall |
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| 78 | | May 03/00(CA) | Endgame, Part Three: The Seeds of the Future |
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